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Theses

2009

• Feziwe Mpondo - MSc Thesis, September 2009
• A Comparative Genomics Approach Towards Classifying Immunity-related Proteins in the Tsetse Fly

• Kavisha Ramdayal - MSc Thesis, September 2009
• Incidence and Regulatory Implications of Single Nucleotide Polymorphisms among Established Ovarian Cancer Genes

• Sarah Wambui - MSc Thesis, September 2009
• An evolutionary genomics approach towards analysis of genes implicated in transmission of trypanosomes between tsetse fly and mammalian host

2006

• Mario Jonas - MSc Thesis, September 2006
• High Performance Computing and Algorithm Development: Application of Dataset Development to Algorithm Parameterisation

• Farahnaz Ketwaroo - MSc Thesis, September 2006
• Detection of positive selection in longitudinal Nevirapine treated reverse transcriptase sequences

2005

• Anelda Boardman - MSc Thesis, March 2005
• Assessment of genome visualization tools relevant to HIV genome research: Development of a genome browser prototype

• Nothemba Kula - MSc Thesis, March 2005
• Mung Bean Nuclease Digestion of Plasmodium DNA: Fact or Fiction?

• Faizel Mosoval - MSc Thesis, March 2005
• Determining the rate of structural changes in human duplicate genes

2003

• Janet Kelso - PhD Thesis, April 2003
• The Development and Application of Informatics-based Systems for the Analysis of the Human Transcriptome.

• Victoria Nembaware - MSc Thesis
• Analysis of sequence divergence using completely sequenced genomes.

2002

• Elana Ernstoff - MSc Thesis, December 2002
• HIV Subtype C Diversity: Analysis of the Relationship of Sequence Diversity to Proposed Epitope Locations.

• Tzu-ming Chern - MSc Thesis, September 2002
• Low Detection of Exon-skipping in Mouse Genes Orthologous to Human Genes on Chromosome 22.

2001

• Junaid Gamieldien - PhD Thesis, December 2001
• Novel Genomic Approaches for the Indentification of Virulence Genes and Drug Targets in Pathogenic Bacteria

• Alan Christoffels - PhD Thesis, September 2001
• Generation of a human gene index and its application to disease candidacy

2000

• Ekow Oppon - PhD Thesis, December 2000
• Synergistic use of Promoter Prediction Algorithms: A choice for Small Training Dataset?

• Andrey Ptitsyn - PhD Thesis, October 2000
• New Algorithms for EST Clustering